Publications (2008, 2009)

[Research Papers] [Presentations in Academic Meetings]

Research Papers

  1. Neya, S., Takahashi, A., Ode, H., Hoshino, T., Ikezaki, A., Ohgo, Y., Takahashi, M., Furutani, Y., Lorentz-Fonfria, V. A., Kandori, H., Hiramatsu, H., Kitagawa, T., Teraoka, J., Funasaki, N., Nakamura, M. : Electronic Properties in a Five-coordinate Azido Complex of Nonplanar Iron(III) Porphyrin: Revisiting to Quantum Mechanical Spin Admixing. Bull. Chem. Soc. Jpn. 81, 136-141 (2008)
  2. Neya, S., Sato, T., Hoshino, T. : A concise synthesis of monoazaporphyrin from 1,19-dideoxybiladiene-ac. Tetrahedron Lett. 49, 1613-1615 (2008)
  3. Hoshino, T., Iwamoto, K., Ode, H., Ohdomari, I. : Accurate evaluation method of molecular binding affinity from fluctuation frequency. Jpn. J. Appl. Phys. 47, 3719-3725 (2008)
  4. Nishiyama, K., Watanabe, T., Hoshino, T., Ohdomari, I. : The main factor of the decrease in activity of luciferase on the Si surface. Chem. Phys. Lett. 453, 279-282 (2008)
  5. Katagiri, D., Fuji, H., Neya, S., Hoshino, T. : Ab initio Protein Structure Prediction with Force Field Parameters Derived from Water Phase Quantum Chemical Calculation. J. Comput. Chem. 29, 1930-1944 (2008)
  6. Hata, M., Tanaka, Y., Kyoda, N., Osakabe, T., Yuki, H., Ishii, I., Kitada, M., Neya, S., Hoshino, T. : An Epoxidation Mechanism of Carbamazepine by CYP3A4. Bioorg. Med. Chem. 16, 5134-5148 (2008)
  7. Hisatomi, Y., Katagiri, D., Neya, S., Hara, M., Hoshino, T. : Analysis of unfolding process of green fluorescent protein by molecular dynamics simulation. J. Phys. Chem. B 112, 8672-8680 (2008)
  8. Ode, H., Matsuo, Y., Neya, S., Hoshino, T. : Force Field Parameters for Rotation around chi Torsion Axis in Nucleic Acids. J. Comput. Chem. 29, 2531-2542 (2008)
  9. Fuji, H., Suzuki, M., Neya, S., Hoshino, T. : Development of Software Program Predicting the Binding Site and the Binding Mode of Ligands Against a Target Protein. e-J. Surf. Sci. Nanotechnol. 6, 241-245 (2008)
  10. Neya S., Hoshino, T. : Molecular Design of the Novel Oxygen Carrier Based on Corrphycene-substituted Myoglobin. Artificial Blood 16, 3-9 (2008)
  11. Eguchi, H., Ohgo, Y., Ikezaki, A., Neya, S., Nakamura, M. : Bis(1-methylimidazole) Complex of Iron(III) Oxypyriporphyrin Adopting an Intermediate-spin State. Chem. Lett. 37, 768-769 (2008)
  12. Funasaki, N., Ishikawa, S., Neya S. : Advances in Physical Chemistry and Pharmaceutical Applications of Cyclodextrins. Pure Appl. Chem. 80, 1511-1524 (2008)
  13. Nakamura, K., Ikezaki, A., Ohgo, Y., Ikeue, T., Neya, S., Nakamura, M. : Electronic Structure of Six-Coordinate Iron(III) Monoazaporphyrin. Inorg. Chem. 47, 10299-10307 (2008)
  14. Neya. S., Suzuki, M., Ode, H., Hoshino, T., Furutani, Y., Kandori, K., Hori, H. Imai, K., Komatsu, Y. : Functional Evaluation of Iron Oxypyriporphyrin in Protein Heme Pocket. Inorg. Chem. 47, 10771-10778 (2008)
  15. Pang, N., Bian Y., Yokoyaka M., Li R., Fukuda T., Neya S., Jiang J., Kobayashi N. : Sandwich-Type Heteroleptic opposite-(Diazaporphyrinato)cerium Complexes: Synthesis, Spectroscopy, Structure, and Electrochemistry. Eur. J. Inorg. Chem. 2008, 5519-5523 (2008)
  16. Neya, S. : Biological Significance Hidden in the Shape of Porphyrins. Kagaku to Kyoiku 56, 330-331 (2008)
  17. Sankar, J., Mori, S., Saito, S., Rath, H., Suzuki, M., Inokuma, Y., Shinokubo, H., Kim, K. S., Yoon, Z. S., Shin, J.-Y., Lim, J. M., Matsuzaki, Y., Matsushita, O., Muranaka, A., Kobayashi, N., Kim, D., Osuka, A.: Unambiguous Identification of M?bius Aromaticiy for meso-Aryl Substituted [28]Hexaphyrins(1.1.1.1.1.1) J. Am. Chem. Soc. 130, 13568-13579 (2008)
  18. Koide, T., Kashiwazaki, G., Suzuki, M., Furukawa, K., Yoon, M.-C., Cho, S., Kim, D., Osuka, A.: A Stable Radical from Facile Oxygenation of meso-Free 5,10,20,25-Tetrakis(pentafluorophenyl) Substituted [26]Hexaphyrin(1.1.1.1.1.1) Angew. Chem. Int. Ed. 47, 9661-9665 (2008)
  19. Neya, S., Suzuki, M., Hoshino, T. : Novel Controlling Mechanism of the Oxygen Affinity in Myoglobin with Isomeric Porphyrins. Artificial Organs i33, 189-193 (2009)
  20. Fuji H., Urano E., Futahashi Y., Hamatake M., Tatsumi J., Hoshino T., Morikawa Y., Yamamoto N., Komano J., : Derivatives of 5-Nitro-furan-2-carboxylic Acid Carbamoylmethyl Ester Inhibit RNase H Activity Associated with HIV-1 Reverse Transcriptase.J. Med. Chem. 52, 1380-1387 (2009)
  21. Li W., Ode H., Hoshino T., Liu H., Tang Y., Jiang H., : Reduced Catalytic Activity of P450 2A6 Mutants with Coumarin: A Computational Investigation.J. Chem. Theory Computat. 5, 1411-1420 (2009)
  22. Yamagishi, J., Imai, Y., Mori,K., Suzuki, M., Neya, S., Hoshino, T. : Analysis on the water retaining capacity of membrane by molecular dynamics simulations. e-J. Surf. Sci. Nanotech. 7, 591-595 (2009)
  23. Li, W., Tang, Y., Hoshino, T., Neya, S. : Molecular modeling of human cytochrome P450 2W1 and its interactions with substrates. J. Mol. Graphic Model. 28, 170-176 (2009)
  24. Ohgo, Y., Neya, S., Hashizume, D., Nakamura. M. : The Spin-Crossover Triangle in the Iron(III) Porphyrinoids. Nippon Kessho Gakkaishi 51, 62-64 (2009)
  25. Yoon, M.-C., Cho, S., Suzuki, M., Osuka, A., Kim, D.: Aromatic versus Antiaromatic Effect on Photophysical Properties of Conformationally Locked trans-Vinylene Bridged Hexaphyrins. J. Am. Chem. Soc. 131, 7360-7367 (2009)
  26. Muranaka, A., Matsushita, O., Yoshida, K., Mori, S., Suzuki, M., Furuyama, T., Uchiyama, M., Osuka, A., Kobayashi, N. :Application of the Perimeter Model to the Assignment of the Electronic Absorption Spectra of Gold(III) Hexaphyrins with [4n+2] and [4n] pi-Electron Systems. Chem. Eur. J. 15, 3744-3751 (2009)
  27. Yong-Shu, X., Yamaguchi, K., Toganoh, M., Uno, H., Suzuki, M., Mori, S., Saito, S., Osuka, A., Furuta, H.:Triply N-Confused Hexaphyrins: New Near-IR Luminescent Dyes of a Triangular Shape. Angew. Chem. Int. Ed. 48, 5496-5499 (2009)
  28. Inoue, M., Kim, K. S., Suzuki, M., Lim, J. M., Shin, J.-Y., Kim, D., Osuka, A.:Thermal Fusion Reactions of meso-(3-Thienyl) Groups in [26]Hexaphyrins to Produce Mobius Aromatic Molecules. Angew. Chem. Int. Ed. 48, 6687-6690 (2009)

Reviews

Presentations in Academic Meetings

  1. Neya, S., Suzuki, M., Hoshino, Y., Komatsu, T. : Vanished Oxygen Affinity of Myoglobin by Pyridine-containing Heme.The 6th Current Issues on Blood Substitute Research. Artificial Blood 16, 91, Tokyo（2008)
  2. Ohgo, Y., Hashizume, D., Nakamura, M., Neya, S. : The Spin-crossover Observed in the 6-Coordinated Iron(III) Porphyrinoid Complexes. The Fifth International Conference on Porphyrins and Phthalocyanines.The Fifth International Conference on Porphyrins and Phthalocyanines. T-10, Moscow（2008)
  3. Okimoto,N., Futatsugi, N., Suenaga, A., Fuji, H., Yanai, R., Ohno, Y., Narumi, T., Taiji, M. : High-performance Drug Discovery: Computational Screening by Combining Docking and Molecular Dynamics Simulations.2008 Annual Meeting of CBI Society, Tokyo, Japan, Proceedings 125,(2008)
  4. Futatsugi, N., Okimoto,N., Suenaga, A., Fuji, H., Narumi, T., Ohno, Y., Yanai, R., Taiji, M. : In Silico Prediction of Side Effect via the Specificities of Kinase Inhibitors.2008 Annual Meeting of CBI Society, Tokyo, Japan, Proceedings 132,（2008)
  5. Fuji, H., Hoshino, T. : Development of software program predicting the binding site and the binding mode of ligands against a target protein.5th International Symposium on Surface Science and Technology, Abstract 50,（2008)
  6. Koide, T., Furukawa, K., Kashiwazaki, G., Osuka, A., Suzuki, M.: Synthesis of 5,10,20,25-tetrakis(pentafluorophenyl)- hexaphyrin(1.1.1.1.1.1) and its metal complexes.The Fifth International Conference on Porphyrins and Phthalocyanines, Abstruct-P 423,ス2008)
  7. Yamagishi, J., Imai, Y., Hoshino, T. : Analysis of the water retention capacity of ceramide membrane by molecular dynamics simulations.5th International Symposium on Surface Science and Technology, Abstract 153,（2008)
  8. Yamagishi J., Hoshino, T. : Computational analysis of behavior of waters on lipid membrane. 2nd International Symposium on Nanomedicine (ISNM2008) and Asian Core Symposium-Nano and Biomedical Molecular Science, Okazaki, Japan, abstract, O-7-08 (2009)
  9. Neya, S.:Desing of heme molecular shape to control of the oxygen affinity of myoglobin.55th Annual Meeting of American Society for Artificial Internal Organs-International Federation of Artificial Organs, Dallas, USス2009ス
  10. Neya, S., Suzuki, M., Hoshino, T.:Control of the oxygen affinity of myoglobin by designing heme molecular shape.14th International Conference on Biological Inorganic Chemistry, E-05(P219) Nagoyaス2009ス
  11. Miyazaki, T., Neya, T., Teraoka, J.:Subtle Interactions between Porphyrin and Apoprotein Probed by Breathing Raman Band.14th International Conference on Biological Inorganic Chemistry, P554 Nagoyaス2009ス
  12. Ohgo, Y., Neya, S., Hashizume, D., Nakamura, M.:Isocyanide Probe for the Determination of the Electronic Structure in Iron(III) Porphyrinoids.14th International Conference on Biological Inorganic Chemistry, P662 Nagoyaス2009ス
  13. Suzuki, M., Hoshino, T., Neya, S.:Synthesis and Properties of ス-Alkyl Substituted Haxaphyrins(1,1,1,1,1,1,1).14th International Conference on Biological Inorganic Chemistry, P104 Nagoyaス2009ス

Patent

  1. Sato, T., Tomura, T., Miki, T., Takada, M., Neya, S.:Two-photon-absorption materials and application to nonerasable memory regeneration process and materials.Jpn. Kokai Tokkyo Koho 2008163184（2008)
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